Thicy_0483 cytochrome b/b6 domain-containing protein [Thioalkalimicrobium cyclicum ALM1] - Gene

Summary

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Gene symbol: Thicy_0483
Gene description: cytochrome b/b6 domain-containing protein
Locus tag: Thicy_0483
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Thioalkalimicrobium cyclicum ALM1 (strain: ALM1)
Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium

Genomic context

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Location :: country: USA: California, Lake Mono, other: 2002, isolation source: water, other: 38.012 N 118.976 W

Sequence :: NC_015581.1 (612168..613412)

NC_015581.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence

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Pathways from BioSystems

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Cytochrome bc1 complex respiratory unit, organism-specific biosystem (from KEGG)
Cytochrome bc1 complex respiratory unit, organism-specific biosystemStructural complex; Energy metabolism; ATP synthesis
Cytochrome bc1 complex respiratory unit, conserved biosystem (from KEGG)
Cytochrome bc1 complex respiratory unit, conserved biosystemStructural complex; Energy metabolism; ATP synthesis
Metabolic pathways, organism-specific biosystem (from KEGG)
Metabolic pathways, organism-specific biosystem
Metabolic pathways
Nitrogen metabolism, organism-specific biosystem (from KEGG)
Nitrogen metabolism, organism-specific biosystemThe biological process of the nitrogen cycle is a complex interplay among many microorganisms catalyzing different reactions. In biological world, nitrogen is found in varying oxidation states from n...
Nitrogen metabolism, conserved biosystem (from KEGG)
Nitrogen metabolism, conserved biosystemThe biological process of the nitrogen cycle is a complex interplay among many microorganisms catalyzing different reactions. In biological world, nitrogen is found in varying oxidation states from n...
Oxidative phosphorylation, organism-specific biosystem (from KEGG)
Oxidative phosphorylation, organism-specific biosystem
Oxidative phosphorylation
Oxidative phosphorylation, conserved biosystem (from KEGG)
Oxidative phosphorylation, conserved biosystem
Oxidative phosphorylation
Two-component system, organism-specific biosystem (from KEGG)
Two-component system, organism-specific biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...
Two-component system, conserved biosystem (from KEGG)
Two-component system, conserved biosystemTwo-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor ...

General gene information

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General protein information

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Names: cytochrome b/b6 domain-containing protein

YP_004536735.1

PFAM: Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal~KEGG: tcx:Tcr_0992 cytochrome b/b6-like

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_015581.1

Range

612168..613412

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

YP_004536735.1 cytochrome b/b6 domain-containing protein [Thioalkalimicrobium cyclicum ALM1]

Status: PROVISIONAL

UniProtKB/TrEMBL

F6DBE8

Conserved Domains (3) summary

cd00284
Location:24 – 224
Blast Score: 499

Cytochrome_b_N; Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, ...

cd00290
Location:242 – 385
Blast Score: 275

cytochrome_b_C; Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, ...

MTH00145
Location:20 – 399
Blast Score: 852

CYTB; cytochrome b; Provisional

Nucleotide		Protein
Heading	Accession and Version	Protein
genomic	CP002776.1	AEG31256.1

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Thicy_0483 cytochrome b/b6 domain-containing protein [ Thioalkalimicrobium cyclicum ALM1 ]

Summary

Genomic context

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Pathways from BioSystems

General gene information

General protein information

NCBI Reference Sequences (RefSeq)

Genome Annotation

Reference assembly

Genomic

mRNA and Protein(s)

Additional links

Gene LinkOut

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