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Thicy_0235 ribosomal RNA large subunit methyltransferase N [ Thioalkalimicrobium cyclicum ALM1 ]

Gene ID: 10719029, updated on 6-Jul-2014
Gene symbol
Thicy_0235
Gene description
ribosomal RNA large subunit methyltransferase N
Locus tag
Thicy_0235
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Thioalkalimicrobium cyclicum ALM1 (strain: ALM1)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium
Sequence:
NC_015581.1 (228240..229397)

NC_015581.1Genomic Context describing neighboring genes Neighboring gene iron-sulfur cluster assembly accessory protein Neighboring gene nucleoside diphosphate kinase Neighboring gene hypothetical protein Neighboring gene histidyl-tRNA synthetase

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Names
ribosomal RNA large subunit methyltransferase N
YP_004536490.1
  • TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN;~HAMAP: Ribosomal RNA large subunit methyltransferase RlmN;~KEGG: tcx:Tcr_0620 hypothetical protein~PFAM: Radical SAM

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015581.1 

    Range
    228240..229397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004536490.1 ribosomal RNA large subunit methyltransferase N [Thioalkalimicrobium cyclicum ALM1]

    See proteins identical to YP_004536490.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F6D9X4
    Conserved Domains (2) summary
    cd01335
    Location:124332
    Blast Score: 142
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    COG0820
    Location:16366
    Blast Score: 1257
    COG0820; Predicted Fe-S-cluster redox enzyme [General function prediction only]