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Tcim transcriptional and immune response regulator [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107159649, updated on 14-Mar-2024

Summary

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Gene symbol
Tcim
Gene description
transcriptional and immune response regulator
See related
Ensembl:ENSMMMG00000004221
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000225.1 (358584..360081)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351326.1 (358610..360081)

NW_026000225.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125613261 Neighboring gene uncharacterized LOC125613267 Neighboring gene uncharacterized LOC125613269 Neighboring gene zinc finger matrin-type 4 Neighboring gene secreted frizzled related protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endothelial cell activation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional and immune response regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000225.1 Reference marMar

    Range
    358584..360081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015506244.2 → XP_015361730.1  transcriptional and immune response regulator

    Related
    ENSMMMP00000004625.1
    Conserved Domains (1) summary
    pfam15063
    Location:33 → 105
    TC1; Thyroid cancer protein 1
Nucleotide Protein
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