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Helq helicase, POLQ like [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107153678, updated on 14-Mar-2024

Summary

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Gene symbol
Helq
Gene description
helicase, POLQ like
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000119.1 (2611148..2658911)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351269.1 (2611129..2654744)

NW_026000119.1Genomic Context describing neighboring genes Neighboring gene abraxas 1, BRCA1 A complex subunit Neighboring gene mitochondrial ribosomal protein S18C Neighboring gene uncharacterized LOC125611059 Neighboring gene heparanase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase POLQ-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000119.1 Reference marMar

    Range
    2611148..2658911
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048784730.1 → XP_048640687.1  helicase POLQ-like isoform X4

  2. XM_048784729.1 → XP_048640686.1  helicase POLQ-like isoform X3

  3. XM_048784728.1 → XP_048640685.1  helicase POLQ-like isoform X1

  4. XM_015499212.2 → XP_015354698.1  helicase POLQ-like isoform X2

    Conserved Domains (4) summary
    smart00490
    Location:597 → 675
    HELICc; helicase superfamily c-terminal domain
    PRK02362
    Location:281 → 1028
    PRK02362; ski2-like helicase; Provisional
    pfam00270
    Location:308 → 469
    DEAD; DEAD/DEAH box helicase
    pfam14520
    Location:975 → 1028
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein
Heading Accession and Version

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