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Commd6 COMM domain containing 6 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107153212, updated on 14-Mar-2024

Summary

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Gene symbol
Commd6
Gene description
COMM domain containing 6
See related
Ensembl:ENSMMMG00000016993
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_025999942.1 (4494470..4499978)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351266.1 (4494486..4499974)

NW_025999942.1Genomic Context describing neighboring genes Neighboring gene LIM domain 7 Neighboring gene uncharacterized LOC125616312 Neighboring gene ubiquitin C-terminal hydrolase L3 Neighboring gene tRNA pseudouridine synthase Pus10-like Neighboring gene uncharacterized LOC125616291 Neighboring gene calmodulin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NF-kappaB binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COMM domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_025999942.1 Reference marMar

    Range
    4494470..4499978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015498729.2 → XP_015354215.1  COMM domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C5ZS85
    Related
    ENSMMMP00000019218.1
    Conserved Domains (1) summary
    cl06336
    Location:6 → 85
    Commd; COMM_Domain, a family of domains found at the C-terminus of HCarG, the copper metabolism gene MURR1 product, and related proteins. Presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in ...

  2. XM_015498730.2 → XP_015354216.1  COMM domain-containing protein 6 isoform X2

    Conserved Domains (1) summary
    cl06336
    Location:10 → 75
    Commd; COMM_Domain, a family of domains found at the C-terminus of HCarG, the copper metabolism gene MURR1 product, and related proteins. Presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in ...

  3. XM_048801295.1 → XP_048657252.1  COMM domain-containing protein 6 isoform X2

  4. XM_048801296.1 → XP_048657253.1  COMM domain-containing protein 6 isoform X2

  5. XM_015498731.2 → XP_015354217.1  COMM domain-containing protein 6 isoform X3

    Conserved Domains (1) summary
    cl06336
    Location:1 → 56
    Commd; COMM_Domain, a family of domains found at the C-terminus of HCarG, the copper metabolism gene MURR1 product, and related proteins. Presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in ...
Nucleotide Protein
Heading Accession and Version

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