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Copg2 COPI coat complex subunit gamma 2 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107149052, updated on 14-Mar-2024

Summary

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Gene symbol
Copg2
Gene description
COPI coat complex subunit gamma 2
See related
Ensembl:ENSMMMG00000013226
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000164.1 (19567103..19662363)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351245.1 (19567147..19662561)

NW_026000164.1Genomic Context describing neighboring genes Neighboring gene MLV-related proviral Env polyprotein-like Neighboring gene uncharacterized LOC125611594 Neighboring gene uncharacterized LOC125611647 Neighboring gene mesoderm specific transcript Neighboring gene centrosomal protein 41 Neighboring gene uncharacterized LOC125611649 Neighboring gene carboxypeptidase A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in organelle transport along microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit gamma-2
Names
coatomer protein complex subunit gamma 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000164.1 Reference marMar

    Range
    19567103..19662363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015493826.2 → XP_015349312.1  coatomer subunit gamma-2

    UniProtKB/TrEMBL
    A0A8C5ZGG3
    Related
    ENSMMMP00000014901.1
    Conserved Domains (5) summary
    pfam08752
    Location:501 → 644
    COP-gamma_platf; Coatomer gamma subunit appendage platform subdomain
    pfam11701
    Location:213 → 385
    UNC45-central; Myosin-binding striated muscle assembly central
    pfam13646
    Location:179 → 274
    HEAT_2; HEAT repeats
    pfam16381
    Location:646 → 758
    Coatomer_g_Cpla; Coatomer subunit gamma-1 C-terminal appendage platform
    sd00044
    Location:286 → 311
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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