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Mkrn1 makorin ring finger protein 1 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107149005, updated on 14-Mar-2024

Summary

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Gene symbol
Mkrn1
Gene description
makorin ring finger protein 1
See related
Ensembl:ENSMMMG00000011534
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000164.1 (11116980..11129279)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351245.1 (11116971..11129279)

NW_026000164.1Genomic Context describing neighboring genes Neighboring gene aarF domain containing kinase 2 Neighboring gene DENN domain containing 2A Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene solute carrier family 37 member 3 Neighboring gene uncharacterized LOC125611600

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase makorin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000164.1 Reference marMar

    Range
    11116980..11129279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015493769.2 → XP_015349255.1  E3 ubiquitin-protein ligase makorin-1

    UniProtKB/TrEMBL
    A0A8C5ZDV0
    Related
    ENSMMMP00000012917.1
    Conserved Domains (4) summary
    smart00356
    Location:24 → 46
    ZnF_C3H1; zinc finger
    PHA03096
    Location:157 → 306
    PHA03096; p28-like protein; Provisional
    cd00162
    Location:217 → 271
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam15815
    Location:336 → 416
    MKRN1_C; E3 ubiquitin-protein ligase makorin-1, C-terminal
Nucleotide Protein
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Gene LinkOut

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