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Atg101 autophagy related 101 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107148648, updated on 14-Mar-2024

Summary

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Gene symbol
Atg101
Gene description
autophagy related 101
See related
Ensembl:ENSMMMG00000000874
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_025999960.1 (17719112..17726873)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351244.1 (17719153..17726999)

NW_025999960.1Genomic Context describing neighboring genes Neighboring gene activin A receptor type 1B Neighboring gene trafficking regulator and scaffold protein tamalin Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene small integral membrane protein 41 Neighboring gene keratin 80

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
autophagy-related protein 101

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_025999960.1 Reference marMar

    Range
    17719112..17726873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015493388.2 → XP_015348874.1  autophagy-related protein 101

    UniProtKB/TrEMBL
    A0A8C5YJK2
    Related
    ENSMMMP00000000934.1
    Conserved Domains (1) summary
    pfam07855
    Location:9 → 172
    ATG101; Autophagy-related protein 101
Nucleotide Protein
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Gene LinkOut

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