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Alkbh4 alkB homolog 4, lysine demethylase [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107147061, updated on 14-Mar-2024

Summary

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Gene symbol
Alkbh4
Gene description
alkB homolog 4, lysine demethylase
See related
Ensembl:ENSMMMG00000011324
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000185.1 (28349721..28357555)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351238.1 (28349731..28355265)

NW_026000185.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II subunit J Neighboring gene leucine rich repeats and WD repeat domain containing 1 Neighboring gene ORAI calcium release-activated calcium modulator 2 Neighboring gene PRKR interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables demethylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in contractile ring IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in midbody IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-ketoglutarate-dependent dioxygenase alkB homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000185.1 Reference marMar

    Range
    28349721..28357555
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015491461.2 → XP_015346947.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X1

    UniProtKB/TrEMBL
    A0A8C5ZBP5
    Related
    ENSMMMP00000012671.1

  2. XM_048789973.1 → XP_048645930.1  alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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