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Ptk2 protein tyrosine kinase 2 [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107142960, updated on 3-Apr-2024

Summary

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Gene symbol
Ptk2
Gene description
protein tyrosine kinase 2
See related
Ensembl:ENSMMMG00000005381
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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See Ptk2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
40
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_025999949.1 (35176667..35381086, complement)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351228.1 (35177561..35372797, complement)

NW_025999949.1Genomic Context describing neighboring genes Neighboring gene septin-14-like Neighboring gene chromatin accessibility complex subunit 1 Neighboring gene argonaute RISC catalytic component 2 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC125616507

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
focal adhesion kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_025999949.1 Reference marMar

    Range
    35176667..35381086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048802205.1 → XP_048658162.1  focal adhesion kinase 1 isoform X19

  2. XM_048802193.1 → XP_048658150.1  focal adhesion kinase 1 isoform X8

  3. XM_048802213.1 → XP_048658170.1  focal adhesion kinase 1 isoform X27

  4. XM_048802215.1 → XP_048658172.1  focal adhesion kinase 1 isoform X29

  5. XM_048802219.1 → XP_048658176.1  focal adhesion kinase 1 isoform X33

  6. XM_048802220.1 → XP_048658177.1  focal adhesion kinase 1 isoform X34

  7. XM_048802218.1 → XP_048658175.1  focal adhesion kinase 1 isoform X32

  8. XM_048802217.1 → XP_048658174.1  focal adhesion kinase 1 isoform X31

  9. XM_048802208.1 → XP_048658165.1  focal adhesion kinase 1 isoform X23

  10. XM_048802198.1 → XP_048658155.1  focal adhesion kinase 1 isoform X13

  11. XM_048802214.1 → XP_048658171.1  focal adhesion kinase 1 isoform X28

  12. XM_015486520.2 → XP_015342006.1  focal adhesion kinase 1 isoform X22

    UniProtKB/TrEMBL
    A0A8C5Z170
    Conserved Domains (6) summary
    cd05056
    Location:422 → 691
    PTKc_FAK; Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase
    smart00295
    Location:36 → 258
    B41; Band 4.1 homologues
    cd13190
    Location:254 → 364
    FERM_C_FAK1; FERM domain C-lobe of Focal Adhesion Kinase 1 and 2
    cd14473
    Location:143 → 248
    FERM_B-lobe; FERM domain B-lobe
    pfam03623
    Location:926 → 1055
    Focal_AT; Focal adhesion targeting region
    pfam07714
    Location:429 → 683
    Pkinase_Tyr; Protein tyrosine kinase

  13. XM_048802195.1 → XP_048658152.1  focal adhesion kinase 1 isoform X10

  14. XM_048802216.1 → XP_048658173.1  focal adhesion kinase 1 isoform X30

  15. XM_048802210.1 → XP_048658167.1  focal adhesion kinase 1 isoform X25

  16. XM_048802209.1 → XP_048658166.1  focal adhesion kinase 1 isoform X24

  17. XM_048802196.1 → XP_048658153.1  focal adhesion kinase 1 isoform X11

  18. XM_048802211.1 → XP_048658168.1  focal adhesion kinase 1 isoform X26

  19. XM_048802206.1 → XP_048658163.1  focal adhesion kinase 1 isoform X20

  20. XM_048802190.1 → XP_048658147.1  focal adhesion kinase 1 isoform X6

  21. XM_048802207.1 → XP_048658164.1  focal adhesion kinase 1 isoform X21

  22. XM_048802203.1 → XP_048658160.1  focal adhesion kinase 1 isoform X17

  23. XM_048802201.1 → XP_048658158.1  focal adhesion kinase 1 isoform X16

  24. XM_048802187.1 → XP_048658144.1  focal adhesion kinase 1 isoform X3

  25. XM_048802204.1 → XP_048658161.1  focal adhesion kinase 1 isoform X18

  26. XM_048802200.1 → XP_048658157.1  focal adhesion kinase 1 isoform X15

  27. XM_048802199.1 → XP_048658156.1  focal adhesion kinase 1 isoform X14

  28. XM_048802197.1 → XP_048658154.1  focal adhesion kinase 1 isoform X12

  29. XM_048802194.1 → XP_048658151.1  focal adhesion kinase 1 isoform X9

  30. XM_048802192.1 → XP_048658149.1  focal adhesion kinase 1 isoform X7

  31. XM_048802189.1 → XP_048658146.1  focal adhesion kinase 1 isoform X5

  32. XM_048802188.1 → XP_048658145.1  focal adhesion kinase 1 isoform X4

  33. XM_048802186.1 → XP_048658143.1  focal adhesion kinase 1 isoform X2

  34. XM_048802185.1 → XP_048658142.1  focal adhesion kinase 1 isoform X1

  35. XM_048802222.1 → XP_048658179.1  focal adhesion kinase 1 isoform X35

  36. XM_048802221.1 → XP_048658178.1  focal adhesion kinase 1 isoform X35

  37. XM_048802224.1 → XP_048658181.1  focal adhesion kinase 1 isoform X36

Nucleotide Protein
Heading Accession and Version

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