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PCOLCE procollagen C-endopeptidase enhancer [ Gekko japonicus ]

Gene ID: 107124427, updated on 14-Mar-2024

Summary

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Gene symbol
PCOLCE
Gene description
procollagen C-endopeptidase enhancer
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015177030.1 (613888..619963)

NW_015177030.1Genomic Context describing neighboring genes Neighboring gene inhibitor of CDK, cyclin A1 interacting protein 1 Neighboring gene kinesin family member 1C Neighboring gene progestin and adipoQ receptor family member 9-like Neighboring gene F-box protein 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015177030.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen C-endopeptidase enhancer 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015177030.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    613888..619963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015427892.1 → XP_015283378.1  procollagen C-endopeptidase enhancer 1

    Conserved Domains (2) summary
    cd00041
    Location:38 → 149
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd03576
    Location:342 → 467
    NTR_PCOLCE; NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which ...
Nucleotide Protein
Heading Accession and Version

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