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SCARB2 scavenger receptor class B member 2 [ Gekko japonicus ]

Gene ID: 107123779, updated on 14-Mar-2024

Summary

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Gene symbol
SCARB2
Gene description
scavenger receptor class B member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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See SCARB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015176468.1 (652924..730693, complement)

NW_015176468.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase with EF-hand domain 2 Neighboring gene nucleoporin 54 Neighboring gene starch binding domain 1 Neighboring gene coiled-coil domain containing 158

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015176468.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables scavenger receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein targeting to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosome membrane protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015176468.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    652924..730693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015427124.1 → XP_015282610.1  lysosome membrane protein 2 isoform X1

    Conserved Domains (1) summary
    pfam01130
    Location:13 → 457
    CD36; CD36 family

  2. XM_015427125.1 → XP_015282611.1  lysosome membrane protein 2 isoform X2

    Conserved Domains (1) summary
    pfam01130
    Location:13 → 457
    CD36; CD36 family
Nucleotide Protein
Heading Accession and Version

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