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DBR1 debranching RNA lariats 1 [ Gekko japonicus ]

Gene ID: 107122020, updated on 14-Mar-2024

Summary

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Gene symbol
DBR1
Gene description
debranching RNA lariats 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015174913.1 (219408..233225)

NW_015174913.1Genomic Context describing neighboring genes Neighboring gene fibrillarin Neighboring gene interleukin 20 receptor subunit beta Neighboring gene kallikrein-15-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015174913.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA lariat debranching enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lariat debranching enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015174913.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    219408..233225
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015425043.1 → XP_015280529.1  lariat debranching enzyme

    Conserved Domains (3) summary
    cd00844
    Location:9 → 271
    MPP_Dbr1_N; Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain
    pfam00149
    Location:7 → 236
    Metallophos; Calcineurin-like phosphoesterase
    pfam05011
    Location:253 → 381
    DBR1; Lariat debranching enzyme, C-terminal domain
Nucleotide Protein
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