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RPA1 replication protein A1 [ Gekko japonicus ]

Gene ID: 107119402, updated on 14-Mar-2024

Summary

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Gene symbol
RPA1
Gene description
replication protein A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015173122.1 (1018089..1096530)

NW_015173122.1Genomic Context describing neighboring genes Neighboring gene serpin family F member 1 Neighboring gene SET and MYND domain containing 4 Neighboring gene reticulon 4 receptor like 1 Neighboring gene diphthamide biosynthesis 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015173122.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
replication protein A 70 kDa DNA-binding subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015173122.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    1018089..1096530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015421866.1 → XP_015277352.1  replication protein A 70 kDa DNA-binding subunit

    Conserved Domains (5) summary
    cd04474
    Location:185 → 287
    RPA1_DBD_A; RPA1_DBD_A: A subfamily of OB folds corresponding to the second OB fold, the ssDNA-binding domain (DBD)-A, of human RPA1 (also called RPA70). RPA1 is the large subunit of Replication protein A (RPA). RPA is a nuclear ssDNA-binding protein (SSB) which ...
    TIGR00617
    Location:2 → 611
    rpa1; replication factor-a protein 1 (rpa1)
    pfam08646
    Location:460 → 605
    Rep_fac-A_C; Replication factor-A C terminal domain
    pfam16900
    Location:304 → 388
    REPA_OB_2; Replication protein A OB domain
    cl09930
    Location:5 → 102
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Nucleotide Protein
Heading Accession and Version

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