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HOXA5 homeobox A5 [ Gekko japonicus ]

Gene ID: 107116631, updated on 14-Mar-2024

Summary

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Gene symbol
HOXA5
Gene description
homeobox A5
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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See HOXA5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015170898.1 (1194943..1197172, complement)

NW_015170898.1Genomic Context describing neighboring genes Neighboring gene homeobox A3 Neighboring gene homeobox A4 Neighboring gene uncharacterized LOC107116620 Neighboring gene homeobox A6 Neighboring gene homeobox A7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015170898.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015170898.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    1194943..1197172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015418582.1 → XP_015274068.1  homeobox protein Hox-A5

    Conserved Domains (1) summary
    pfam00046
    Location:234 → 286
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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