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MAP1LC3B microtubule associated protein 1 light chain 3 beta [ Gekko japonicus ]

Gene ID: 107114054, updated on 14-Mar-2024

Summary

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Gene symbol
MAP1LC3B
Gene description
microtubule associated protein 1 light chain 3 beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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See MAP1LC3B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015168696.1 (93385..104003)

NW_015168696.1Genomic Context describing neighboring genes Neighboring gene F-box protein 31 Neighboring gene zinc finger CCHC-type containing 14 Neighboring gene junctophilin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015168696.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated proteins 1A/1B light chain 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015168696.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    93385..104003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015415477.1 → XP_015270963.1  microtubule-associated proteins 1A/1B light chain 3B

    Conserved Domains (1) summary
    cd01611
    Location:80 → 188
    GABARAP; Ubiquitin domain of GABA-receptor-associated protein
Nucleotide Protein
Heading Accession and Version

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