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CPNE2 copine 2 [ Gekko japonicus ]

Gene ID: 107111786, updated on 14-Mar-2024

Summary

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Gene symbol
CPNE2
Gene description
copine 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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See CPNE2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015167081.1 (489193..658231, complement)

NW_015167081.1Genomic Context describing neighboring genes Neighboring gene ring finger and SPRY domain containing 1 Neighboring gene proteasome activator subunit 3 interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015167081.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
copine-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015167081.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    489193..658231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015412816.1 → XP_015268302.1  copine-2

    Conserved Domains (3) summary
    cd04047
    Location:151 → 263
    C2B_Copine; C2 domain second repeat in Copine
    cd04048
    Location:20 → 137
    C2A_Copine; C2 domain first repeat in Copine
    cl00057
    Location:272 → 426
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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