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YARS1 tyrosyl-tRNA synthetase 1 [ Gekko japonicus ]

Gene ID: 107107746, updated on 14-Mar-2024

Summary

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Gene symbol
YARS1
Gene description
tyrosyl-tRNA synthetase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Also known as
YARS
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015164182.1 (10821..25238)

NW_015164182.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107107734 Neighboring gene NHS like 3 Neighboring gene syncoilin, intermediate filament protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015164182.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tyrosine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tyrosyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015164182.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    10821..25238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015408069.1 → XP_015263555.1  tyrosine--tRNA ligase, cytoplasmic

    Conserved Domains (3) summary
    cd02799
    Location:363 → 468
    tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...
    TIGR00234
    Location:13 → 328
    tyrS; tyrosyl-tRNA synthetase
    cl00015
    Location:7 → 337
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
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