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PLCE1 phospholipase C epsilon 1 [ Gekko japonicus ]

Gene ID: 107106488, updated on 14-Mar-2024

Summary

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Gene symbol
PLCE1
Gene description
phospholipase C epsilon 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015163097.1 (431010..639963, complement)

NW_015163097.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 12 Neighboring gene NOC3 like DNA replication regulator Neighboring gene solute carrier family 35 member G1-like Neighboring gene solute carrier family 35 member G1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015163097.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015163097.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    431010..639963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015406644.1 → XP_015262130.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    Conserved Domains (7) summary
    cd00275
    Location:1791 → 1907
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2061 → 2160
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1298 → 1756
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02228
    Location:1231 → 1906
    PLN02228; Phosphoinositide phospholipase C
    pfam00617
    Location:440 → 619
    RasGEF; RasGEF domain
    pfam09279
    Location:1231 → 1286
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl00155
    Location:1941 → 2035
    UBQ; Ubiquitin-like proteins

  2. XM_015406647.1 → XP_015262133.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X4

    Conserved Domains (7) summary
    cd00275
    Location:1777 → 1893
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2047 → 2146
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1298 → 1742
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02228
    Location:1231 → 1892
    PLN02228; Phosphoinositide phospholipase C
    pfam00617
    Location:440 → 619
    RasGEF; RasGEF domain
    pfam09279
    Location:1231 → 1286
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl00155
    Location:1927 → 2021
    UBQ; Ubiquitin-like proteins

  3. XM_015406646.1 → XP_015262132.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X3

    Conserved Domains (7) summary
    cd00275
    Location:1791 → 1907
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2052 → 2151
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1298 → 1756
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02228
    Location:1231 → 1906
    PLN02228; Phosphoinositide phospholipase C
    pfam00617
    Location:440 → 619
    RasGEF; RasGEF domain
    pfam09279
    Location:1231 → 1286
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl00155
    Location:1941 → 2035
    UBQ; Ubiquitin-like proteins

  4. XM_015406645.1 → XP_015262131.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X2

    Conserved Domains (7) summary
    cd00275
    Location:1791 → 1907
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2061 → 2160
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1298 → 1756
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02228
    Location:1231 → 1906
    PLN02228; Phosphoinositide phospholipase C
    pfam00617
    Location:440 → 619
    RasGEF; RasGEF domain
    pfam09279
    Location:1231 → 1286
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl00155
    Location:1941 → 2035
    UBQ; Ubiquitin-like proteins

  5. XM_015406643.1 → XP_015262129.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    Conserved Domains (7) summary
    cd00275
    Location:1791 → 1907
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd01780
    Location:2061 → 2160
    PLC_epsilon_RA; Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase
    cd08596
    Location:1298 → 1756
    PI-PLCc_epsilon; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon
    PLN02228
    Location:1231 → 1906
    PLN02228; Phosphoinositide phospholipase C
    pfam00617
    Location:440 → 619
    RasGEF; RasGEF domain
    pfam09279
    Location:1231 → 1286
    EF-hand_like; Phosphoinositide-specific phospholipase C, efhand-like
    cl00155
    Location:1941 → 2035
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
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