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ATXN10 ataxin 10 [ Gekko japonicus ]

Gene ID: 107105471, updated on 14-Mar-2024

Summary

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Gene symbol
ATXN10
Gene description
ataxin 10
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015162000.1 (290098..393479)

NW_015162000.1Genomic Context describing neighboring genes Neighboring gene RIB43A domain with coiled-coils 2 Neighboring gene fibulin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015162000.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015162000.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    290098..393479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015405450.1 → XP_015260936.1  ataxin-10

    Conserved Domains (2) summary
    cd00020
    Location:83 → 184
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam09759
    Location:369 → 466
    Atx10homo_assoc; Spinocerebellar ataxia type 10 protein domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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