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etv4 ETS variant transcription factor 4 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107092751, updated on 14-Mar-2024

Summary

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Gene symbol
etv4
Gene description
ETS variant transcription factor 4
See related
Ensembl:ENSCVAG00000006202
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150471.1 (1829940..1882629)

NW_015150471.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107092906 Neighboring gene mesenchyme homeobox 1 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 8 Neighboring gene thyroid hormone receptor alpha-B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150471.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ETS translocation variant 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150471.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    1829940..1882629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015387391.1 → XP_015242877.1  ETS translocation variant 4

    UniProtKB/TrEMBL
    A0A3Q2DTZ7
    Related
    ENSCVAP00000023107.1, ENSCVAT00000007591.1
    Conserved Domains (2) summary
    smart00413
    Location:380 → 464
    ETS; erythroblast transformation specific domain
    pfam04621
    Location:5 → 379
    ETS_PEA3_N; PEA3 subfamily ETS-domain transcription factor N terminal domain
Nucleotide Protein
Heading Accession and Version

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