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myclb MYCL proto-oncogene, bHLH transcription factor b [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107092591, updated on 14-Mar-2024

Summary

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Gene symbol
myclb
Gene description
MYCL proto-oncogene, bHLH transcription factor b
See related
Ensembl:ENSCVAG00000016645
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
mycl
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150840.1 (135952..140965, complement)

NW_015150840.1Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF26.1-like Neighboring gene tRNA isopentenyltransferase 1 Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid b Neighboring gene ints3 and nabp interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150840.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein L-Myc
Names
v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150840.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    135952..140965 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015387153.1 → XP_015242639.1  protein L-Myc

    UniProtKB/TrEMBL
    A0A3Q2D6I6
    Related
    ENSCVAP00000014082.1, ENSCVAT00000030968.1
    Conserved Domains (2) summary
    cd11457
    Location:371 → 443
    bHLHzip_L-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in L-Myc and similar proteins
    pfam01056
    Location:2 → 296
    Myc_N; Myc amino-terminal region
Nucleotide Protein
Heading Accession and Version

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