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LOC107089573 catechol-O-methyltransferase domain containing 1 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107089573, updated on 2-Nov-2023

Summary

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Gene symbol
LOC107089573
Gene description
catechol-O-methyltransferase domain containing 1
See related
Ensembl:ENSCVAG00000022397
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
comtd1
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150465.1 (1397746..1408366)

NW_015150465.1Genomic Context describing neighboring genes Neighboring gene calcium-activated potassium channel subunit alpha-1-like Neighboring gene zinc finger protein 503-like Neighboring gene voltage-dependent anion-selective channel protein 2 Neighboring gene dual specificity phosphatase 13 Neighboring gene sterile alpha motif domain containing 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150465.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catechol O-methyltransferase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150465.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    1397746..1408366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015382473.1 → XP_015237959.1  catechol O-methyltransferase domain-containing protein 1 isoform X2

    Conserved Domains (2) summary
    COG4122
    Location:15 → 223
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]
    cl17173
    Location:25 → 222
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_015382457.1 → XP_015237943.1  catechol O-methyltransferase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2DIW1
    Related
    ENSCVAP00000019077.1, ENSCVAT00000028171.1
    Conserved Domains (2) summary
    COG4122
    Location:49 → 257
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]
    cl17173
    Location:59 → 256
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_015382465.1 → XP_015237951.1  catechol O-methyltransferase domain-containing protein 1 isoform X2

    Conserved Domains (2) summary
    COG4122
    Location:15 → 223
    YrrM; Predicted O-methyltransferase YrrM [General function prediction only]
    cl17173
    Location:25 → 222
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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