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lrrc57 leucine rich repeat containing 57 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107084840, updated on 14-Mar-2024

Summary

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Gene symbol
lrrc57
Gene description
leucine rich repeat containing 57
See related
Ensembl:ENSCVAG00000010419
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150563.1 (1037124..1045913, complement)

NW_015150563.1Genomic Context describing neighboring genes Neighboring gene MAX dimerization protein MGA a Neighboring gene TYRO3 protein tyrosine kinase Neighboring gene HAUS augmin like complex subunit 2 Neighboring gene signal recognition particle 54

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150563.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 57

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150563.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    1037124..1045913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015374886.1 → XP_015230372.1  leucine-rich repeat-containing protein 57

    UniProtKB/TrEMBL
    A0A3Q2CSC9
    Related
    ENSCVAP00000008591.1, ENSCVAT00000001370.1
    Conserved Domains (2) summary
    COG4886
    Location:18 → 184
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:40 → 61
    LRR_RI; leucine-rich repeat [structural motif]

  2. XM_015374885.1 → XP_015230371.1  leucine-rich repeat-containing protein 57

    UniProtKB/TrEMBL
    A0A3Q2CSC9
    Conserved Domains (2) summary
    COG4886
    Location:18 → 184
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:40 → 61
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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