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fbxo9 F-box protein 9 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107084569, updated on 14-Mar-2024

Summary

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Gene symbol
fbxo9
Gene description
F-box protein 9
See related
Ensembl:ENSCVAG00000019503
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See fbxo9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150557.1 (1394057..1400272, complement)

NW_015150557.1Genomic Context describing neighboring genes Neighboring gene glutamate-cysteine ligase, catalytic subunit Neighboring gene ELOVL fatty acid elongase 5 Neighboring gene ciliogenesis associated kinase 1 Neighboring gene glutathione S-transferase, alpha tandem duplicate 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150557.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150557.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    1394057..1400272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015374473.1 → XP_015229959.1  F-box only protein 9

    UniProtKB/TrEMBL
    A0A3Q2G2S9
    Related
    ENSCVAP00000016540.1, ENSCVAT00000024943.1
    Conserved Domains (1) summary
    pfam12937
    Location:164 → 215
    F-box-like; F-box-like
Nucleotide Protein
Heading Accession and Version

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