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slc1a1 solute carrier family 1 member 1 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107080745, updated on 14-Mar-2024

Summary

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Gene symbol
slc1a1
Gene description
solute carrier family 1 member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015152734.1 (19455..33725, complement)

NW_015152734.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107080747

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015152734.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
excitatory amino acid transporter 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015152734.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    19455..33725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015368951.1 → XP_015224437.1  excitatory amino acid transporter 3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2D3V3
    Conserved Domains (1) summary
    pfam00375
    Location:3 → 379
    SDF; Sodium:dicarboxylate symporter family

  2. XM_015368952.1 → XP_015224438.1  excitatory amino acid transporter 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2D3V3
    Conserved Domains (1) summary
    pfam00375
    Location:3 → 351
    SDF; Sodium:dicarboxylate symporter family
Nucleotide Protein
Heading Accession and Version

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