U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ripply3 ripply transcriptional repressor 3 [ Lepisosteus oculatus (spotted gar) ]

Gene ID: 107076723, updated on 14-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ripply3
Gene description
ripply transcriptional repressor 3
See related
Ensembl:ENSLOCG00000005009
Gene type
protein coding
RefSeq status
MODEL
Organism
Lepisosteus oculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ripply3 in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
4
Annotation release Status Assembly LG Location
101 current LepOcu1 (GCF_000242695.1) LG3 NC_023181.1 (6869942..6872306, complement)

Linkage Group LG3 - NC_023181.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase TTC3-like Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class P Neighboring gene holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) Neighboring gene SIM bHLH transcription factor 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_023181.1 Chromosome LG3 Reference LepOcu1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in embryonic pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein ripply3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lepisosteus oculatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepOcu1 Primary Assembly

Genomic

  1. NC_023181.1 Reference LepOcu1 Primary Assembly

    Range
    6869942..6872306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015341611.1 → XP_015197097.1  protein ripply3 isoform X2

    UniProtKB/TrEMBL
    W5MCC0
    Related
    ENSLOCP00000006029.1, ENSLOCT00000006037.1
    Conserved Domains (1) summary
    pfam14998
    Location:47 → 123
    Ripply; Transcription Regulator

  2. XM_015341610.1 → XP_015197096.1  protein ripply3 isoform X1

    UniProtKB/TrEMBL
    W5MCC0
    Conserved Domains (1) summary
    pfam14998
    Location:60 → 136
    Ripply; Transcription Regulator
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.