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TSPOAP1 TSPO associated protein 1 [ Vicugna pacos (alpaca) ]

Gene ID: 107035051, updated on 14-Mar-2024

Summary

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Gene symbol
TSPOAP1
Gene description
TSPO associated protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See TSPOAP1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
30
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 16 Unlocalized Scaffold NW_021964189.1 (12062..34454, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005883128.1 (396556..418556)

NW_021964189.1Genomic Context describing neighboring genes Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene ring finger protein 43

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peripheral-type benzodiazepine receptor-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964189.1 Reference VicPac3.1 Primary Assembly

    Range
    12062..34454 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015251921.2 → XP_015107407.2  peripheral-type benzodiazepine receptor-associated protein 1

    UniProtKB/TrEMBL
    A0A6J0B142
    Conserved Domains (6) summary
    cd12012
    Location:1378 → 1439
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1507 → 1566
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:585 → 645
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    PHA03307
    Location:984 → 1365
    PHA03307; transcriptional regulator ICP4; Provisional
    COG1196
    Location:144 → 467
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd00063
    Location:813 → 875
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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