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HCN3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106981519, updated on 13-Mar-2024

Summary

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Gene symbol
HCN3
Gene description
hyperpolarization activated cyclic nucleotide gated potassium channel 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See HCN3 in Genome Data Viewer
Location:
chromosome: E4
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) E4 NC_069395.1 (1320711..1332743)

Chromosome E4 - NC_069395.1Genomic Context describing neighboring genes Neighboring gene secretory carrier membrane protein 3 Neighboring gene CDC like kinase 2 Neighboring gene pyruvate kinase L/R Neighboring gene farnesyl diphosphate synthase Neighboring gene uncharacterized LOC128312929 Neighboring gene RUN and SH3 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069395.1 Chromosome E4 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069395.1 Reference VMU_Ajub_asm_v1.0

    Range
    1320711..1332743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053208781.1 → XP_053064756.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

    UniProtKB/TrEMBL
    A0A6J1YH70

  2. XM_027048287.2 → XP_026904088.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

    UniProtKB/TrEMBL
    A0A6J1YH70
    Conserved Domains (4) summary
    cd00038
    Location:428 → 536
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:93 → 358
    Ion_trans; Ion transport protein
    pfam08412
    Location:49 → 91
    Ion_trans_N; Ion transport protein N-terminal
    cl26464
    Location:605 → 772
    Atrophin-1; Atrophin-1 family

  3. XM_053208782.1 → XP_053064757.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

    UniProtKB/TrEMBL
    A0A6J1YH70

  4. XM_027048288.2 → XP_026904089.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

    UniProtKB/TrEMBL
    A0A6J1YH70
    Conserved Domains (4) summary
    cd00038
    Location:428 → 536
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    pfam00520
    Location:93 → 358
    Ion_trans; Ion transport protein
    pfam08412
    Location:49 → 91
    Ion_trans_N; Ion transport protein N-terminal
    cl26464
    Location:605 → 772
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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