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HMGXB4 HMG-box containing 4 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106981071, updated on 13-Mar-2024

Summary

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Gene symbol
HMGXB4
Gene description
HMG-box containing 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B4
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B4 NC_069387.1 (127139271..127179471)

Chromosome B4 - NC_069387.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113602747 Neighboring gene uncharacterized LOC113602749 Neighboring gene intestine specific homeobox Neighboring gene uncharacterized LOC128311056 Neighboring gene target of myb1 membrane trafficking protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069387.1 Chromosome B4 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
HMG domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069387.1 Reference VMU_Ajub_asm_v1.0

    Range
    127139271..127179471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053226714.1 → XP_053082689.1  HMG domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A6J0A261

  2. XM_015079183.3 → XP_014934669.2  HMG domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A6J0A2H1
    Conserved Domains (2) summary
    cd00084
    Location:450 → 513
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:150 → 275
    DUF4171; Domain of unknown function (DUF4171)

  3. XM_053226713.1 → XP_053082688.1  HMG domain-containing protein 4 isoform X2

  4. XM_015079184.3 → XP_014934670.2  HMG domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A6J0A261
    Conserved Domains (2) summary
    cd00084
    Location:407 → 470
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:107 → 232
    DUF4171; Domain of unknown function (DUF4171)

  5. XM_053226715.1 → XP_053082690.1  HMG domain-containing protein 4 isoform X4

  6. XM_015079186.3 → XP_014934672.2  HMG domain-containing protein 4 isoform X5

    UniProtKB/TrEMBL
    A0A6I9ZZ31
    Conserved Domains (2) summary
    cd00084
    Location:298 → 361
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    pfam13775
    Location:1 → 123
    DUF4171; Domain of unknown function (DUF4171)
Nucleotide Protein
Heading Accession and Version

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