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borcs6 BLOC-1 related complex subunit 6 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106965117, updated on 13-Mar-2024

Summary

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Gene symbol
borcs6
Gene description
BLOC-1 related complex subunit 6
See related
Ensembl:ENSPLAG00000014008
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015114383.1 (35123..41847, complement)

NW_015114383.1Genomic Context describing neighboring genes Neighboring gene Glyco_hydro_56 domain-containing protein Neighboring gene uncharacterized LOC106965116 Neighboring gene sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H Neighboring gene helicase ARIP4-like Neighboring gene ras homolog gene family, member Ab

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015114383.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in lysosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BORC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein C17orf59 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015114383.1 Reference P_latipinna-1.0

    Range
    35123..41847 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015061024.1 → XP_014916510.1  uncharacterized protein C17orf59 homolog isoform X3

    UniProtKB/TrEMBL
    A0A3B3VKK5
    Related
    ENSPLAP00000010981.1, ENSPLAT00000018235.1
    Conserved Domains (1) summary
    pfam10157
    Location:291 → 440
    DUF2365; Uncharacterized conserved protein (DUF2365)

  2. XM_015061022.1 → XP_014916508.1  uncharacterized protein C17orf59 homolog isoform X1

    Conserved Domains (1) summary
    pfam10157
    Location:313 → 462
    DUF2365; Uncharacterized conserved protein (DUF2365)

  3. XM_015061023.1 → XP_014916509.1  uncharacterized protein C17orf59 homolog isoform X2

    Conserved Domains (1) summary
    pfam10157
    Location:298 → 447
    DUF2365; Uncharacterized conserved protein (DUF2365)
Nucleotide Protein
Heading Accession and Version

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