U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

scyl2 SCY1 like pseudokinase 2 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106961841, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
scyl2
Gene description
SCY1 like pseudokinase 2
See related
Ensembl:ENSPLAG00000010135
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113957.1 (68046..78426)

NW_015113957.1Genomic Context describing neighboring genes Neighboring gene apoptotic peptidase activating factor 1 Neighboring gene t-complex 11, testis-specific-like 2 Neighboring gene DEP domain containing 4 Neighboring gene uncharacterized LOC106961844 Neighboring gene uncharacterized LOC106961837

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015113957.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
SCY1-like protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113957.1 Reference P_latipinna-1.0

    Range
    68046..78426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015055896.1 → XP_014911382.1  SCY1-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3B3U4N1
    Conserved Domains (5) summary
    smart00220
    Location:32 → 327
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart01104
    Location:746 → 873
    CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
    cd14011
    Location:38 → 329
    PK_SCY1_like; Pseudokinase domain of Scy1-like proteins
    pfam13634
    Location:782 → 889
    Nucleoporin_FG; Nucleoporin FG repeat region
    sd00044
    Location:410 → 439
    HEAT; HEAT repeat [structural motif]

  2. XM_015055897.1 → XP_014911383.1  SCY1-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A3B3U4N1, A0A3B3U4U6
    Related
    ENSPLAP00000007674.1, ENSPLAT00000004156.1
    Conserved Domains (5) summary
    smart00220
    Location:32 → 327
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    smart01104
    Location:742 → 869
    CTD; Spt5 C-terminal nonapeptide repeat binding Spt4
    cd14011
    Location:38 → 329
    PK_SCY1_like; Pseudokinase domain of Scy1-like proteins
    pfam13634
    Location:778 → 885
    Nucleoporin_FG; Nucleoporin FG repeat region
    sd00044
    Location:410 → 435
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.