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LOC106961564 WD repeat domain, phosphoinositide interacting 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106961564, updated on 2-Nov-2023

Summary

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Gene symbol
LOC106961564
Gene description
WD repeat domain, phosphoinositide interacting 1
See related
Ensembl:ENSPLAG00000023130
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
wipi1
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112674.1 (141382..153551)

NW_015112674.1Genomic Context describing neighboring genes Neighboring gene FAM20A golgi associated secretory pathway pseudokinase Neighboring gene protein kinase cAMP-dependent type I regulatory subunit alpha Neighboring gene arylsulfatase G Neighboring gene solute carrier family 16 member 6 Neighboring gene archaelysin family metallopeptidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112674.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat domain phosphoinositide-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112674.1 Reference P_latipinna-1.0

    Range
    141382..153551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015055375.1 → XP_014910861.1  WD repeat domain phosphoinositide-interacting protein 1

    UniProtKB/TrEMBL
    A0A3B3V064
    Related
    ENSPLAP00000018458.1, ENSPLAT00000027963.1
    Conserved Domains (3) summary
    COG2319
    Location:100 → 274
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:189 → 226
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:88 → 288
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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