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psmc2 proteasome 26S subunit, ATPase 2 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106957986, updated on 13-Mar-2024

Summary

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Gene symbol
psmc2
Gene description
proteasome 26S subunit, ATPase 2
See related
Ensembl:ENSPLAG00000013023
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112662.1 (197764..203887)

NW_015112662.1Genomic Context describing neighboring genes Neighboring gene peptidase, mitochondrial processing subunit beta Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 2 Neighboring gene solute carrier family 26 member 5 Neighboring gene FYVE, RhoGEF and PH domain-containing protein 4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112662.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S protease regulatory subunit 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112662.1 Reference P_latipinna-1.0

    Range
    197764..203887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015049619.1 → XP_014905105.1  26S protease regulatory subunit 7

    UniProtKB/TrEMBL
    A0A3B3UBG7, A0A3B3VJ03
    Related
    ENSPLAP00000010126.1, ENSPLAT00000000050.1
    Conserved Domains (1) summary
    COG1222
    Location:23 → 430
    RPT1; ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

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