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guf1 GTP binding elongation factor GUF1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106957941, updated on 13-Mar-2024

Summary

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Gene symbol
guf1
Gene description
GTP binding elongation factor GUF1
See related
Ensembl:ENSPLAG00000023710
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See guf1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113567.1 (653938..661007)

NW_015113567.1Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha4 Neighboring gene gamma-aminobutyric acid receptor subunit alpha-2-like Neighboring gene phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) Neighboring gene uncharacterized LOC106957944

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113567.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mitochondrial ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
translation factor GUF1, mitochondrial
Names
GUF1 homolog, GTPase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113567.1 Reference P_latipinna-1.0

    Range
    653938..661007
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015049532.1 → XP_014905018.1  translation factor GUF1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3B3V1M7
    Conserved Domains (6) summary
    cd01890
    Location:75 → 252
    LepA; LepA also known as Elongation Factor 4 (EF4)
    PRK05433
    Location:70 → 674
    PRK05433; GTP-binding protein LepA; Provisional
    cd03709
    Location:477 → 556
    lepA_C; lepA_C: This family represents the C-terminal region of LepA, a GTP-binding protein localized in the cytoplasmic membrane. LepA is ubiquitous in Bacteria and Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is missing from Archaea. LepA exhibits ...
    pfam06421
    Location:564 → 670
    LepA_C; GTP-binding protein LepA C-terminus
    cd03699
    Location:260 → 345
    EF4_II; Domain II of Elongation Factor 4 (EF4)
    cd16260
    Location:362 → 436
    EF4_III; Domain III of Elongation Factor 4 (EF4)

  2. XM_015049531.1 → XP_014905017.1  translation factor GUF1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3B3V1M7
    Related
    ENSPLAP00000018814.1, ENSPLAT00000028397.1
    Conserved Domains (6) summary
    cd01890
    Location:76 → 253
    LepA; LepA also known as Elongation Factor 4 (EF4)
    PRK05433
    Location:71 → 675
    PRK05433; GTP-binding protein LepA; Provisional
    cd03709
    Location:478 → 557
    lepA_C; lepA_C: This family represents the C-terminal region of LepA, a GTP-binding protein localized in the cytoplasmic membrane. LepA is ubiquitous in Bacteria and Eukaryota (e.g. Saccharomyces cerevisiae GUF1p), but is missing from Archaea. LepA exhibits ...
    pfam06421
    Location:565 → 671
    LepA_C; GTP-binding protein LepA C-terminus
    cd03699
    Location:261 → 346
    EF4_II; Domain II of Elongation Factor 4 (EF4)
    cd16260
    Location:363 → 437
    EF4_III; Domain III of Elongation Factor 4 (EF4)
Nucleotide Protein
Heading Accession and Version

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