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lcmt2 leucine carboxyl methyltransferase 2 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106950565, updated on 13-Mar-2024

Summary

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Gene symbol
lcmt2
Gene description
leucine carboxyl methyltransferase 2
See related
Ensembl:ENSPLAG00000002366
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113024.1 (12242..21341)

NW_015113024.1Genomic Context describing neighboring genes Neighboring gene lariat debranching enzyme-like Neighboring gene ras-related protein Rab-5B-like Neighboring gene ankyrin repeat domain 44 Neighboring gene splicing factor 3b, subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113024.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wybutosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA wybutosine-synthesizing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113024.1 Reference P_latipinna-1.0

    Range
    12242..21341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015037504.1 → XP_014892990.1  tRNA wybutosine-synthesizing protein 4

    UniProtKB/TrEMBL
    A0A3B3TLZ9
    Related
    ENSPLAP00000001331.1, ENSPLAT00000014916.1
    Conserved Domains (3) summary
    sd00038
    Location:488 → 539
    Kelch; KELCH repeat [structural motif]
    pfam04072
    Location:48 → 228
    LCM; Leucine carboxyl methyltransferase
    pfam13415
    Location:501 → 551
    Kelch_3; Galactose oxidase, central domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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