U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dhx16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106950206, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
dhx16
Gene description
DEAH (Asp-Glu-Ala-His) box polypeptide 16
See related
Ensembl:ENSPLAG00000014305
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113001.1 (211055..226414, complement)

NW_015113001.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106950211 Neighboring gene ring finger protein 183 Neighboring gene lysosomal thioesterase PPT2-A-like Neighboring gene uncharacterized LOC106950213

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015113001.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
Names
DEAH-box helicase 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113001.1 Reference P_latipinna-1.0

    Range
    211055..226414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015036898.1 → XP_014892384.1  putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1

    UniProtKB/TrEMBL
    A0A3B3UF25
    Related
    ENSPLAP00000011207.1, ENSPLAT00000018599.1
    Conserved Domains (5) summary
    smart00487
    Location:406 → 593
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:810 → 894
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:428 → 567
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00271
    Location:611 → 741
    Helicase_C; Helicase conserved C-terminal domain
    pfam07717
    Location:929 → 1027
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold

  2. XM_015036899.1 → XP_014892385.1  putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X2

    Conserved Domains (4) summary
    smart00487
    Location:406 → 593
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:810 → 894
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:428 → 567
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00271
    Location:611 → 741
    Helicase_C; Helicase conserved C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.