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klf3 Kruppel-like factor 3 (basic) [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106947395, updated on 13-Mar-2024

Summary

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Gene symbol
klf3
Gene description
Kruppel-like factor 3 (basic)
See related
Ensembl:ENSPLAG00000022825
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112853.1 (1132157..1148940, complement)

NW_015112853.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106947393 Neighboring gene family with sequence similarity 114 member A1 Neighboring gene TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 Neighboring gene phosphoglucomutase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112853.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 3
Names
Kruppel like factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112853.1 Reference P_latipinna-1.0

    Range
    1132157..1148940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015032373.1 → XP_014887859.1  Krueppel-like factor 3 isoform X2

    UniProtKB/TrEMBL
    A0A3B3V012, A0A3B3W199
    Related
    ENSPLAP00000018241.1, ENSPLAT00000027697.1
    Conserved Domains (3) summary
    COG5048
    Location:88 → 327
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:248 → 267
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:289 → 314
    zf-H2C2_2; Zinc-finger double domain

  2. XM_015032372.1 → XP_014887858.1  Krueppel-like factor 3 isoform X1

    UniProtKB/TrEMBL
    A0A3B3W199
    Related
    ENSPLAP00000031106.1, ENSPLAT00000027679.1
    Conserved Domains (3) summary
    COG5048
    Location:101 → 340
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:261 → 280
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:302 → 327
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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