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exosc6 exosome component 6 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106946286, updated on 11-Apr-2024

Summary

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Gene symbol
exosc6
Gene description
exosome component 6
See related
Ensembl:ENSPLAG00000014150
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112800.1 (306764..311276)

NW_015112800.1Genomic Context describing neighboring genes Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene alanyl-tRNA synthetase 1 Neighboring gene forkhead box L1 Neighboring gene KIAA0513 ortholog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112800.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome complex component MTR3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112800.1 Reference P_latipinna-1.0

    Range
    306764..311276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015030503.1 → XP_014885989.1  exosome complex component MTR3

    UniProtKB/TrEMBL
    A0A3B3UEQ8
    Related
    ENSPLAP00000011109.1, ENSPLAT00000018401.1
    Conserved Domains (2) summary
    cd11371
    Location:45 → 262
    RNase_PH_MTR3; MTR3 subunit of eukaryotic exosome
    PRK03983
    Location:23 → 262
    PRK03983; exosome complex exonuclease Rrp41; Provisional
Nucleotide Protein
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