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vgll1 vestigial like family member 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106945747, updated on 13-Mar-2024

Summary

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Gene symbol
vgll1
Gene description
vestigial like family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See vgll1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112775.1 (474757..479941, complement)

NW_015112775.1Genomic Context describing neighboring genes Neighboring gene CD40 ligand Neighboring gene teleost multiple tissue opsin 3a Neighboring gene adhesion G protein-coupled receptor G4a Neighboring gene tumor necrosis factor receptor superfamily member 27-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112775.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription cofactor vestigial-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112775.1 Reference P_latipinna-1.0

    Range
    474757..479941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015029648.1 → XP_014885134.1  transcription cofactor vestigial-like protein 1

    Conserved Domains (1) summary
    pfam07545
    Location:16 → 43
    Vg_Tdu; Vestigial/Tondu family

  2. XM_015029645.1 → XP_014885131.1  transcription cofactor vestigial-like protein 1

    Conserved Domains (1) summary
    pfam07545
    Location:16 → 43
    Vg_Tdu; Vestigial/Tondu family

  3. XM_015029646.1 → XP_014885132.1  transcription cofactor vestigial-like protein 1

    Conserved Domains (1) summary
    pfam07545
    Location:16 → 43
    Vg_Tdu; Vestigial/Tondu family
Nucleotide Protein
Heading Accession and Version

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