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etv6 ETS variant transcription factor 6 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106945280, updated on 13-Mar-2024

Summary

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Gene symbol
etv6
Gene description
ETS variant transcription factor 6
See related
Ensembl:ENSPLAG00000001979
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See etv6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112753.1 (195050..228423)

NW_015112753.1Genomic Context describing neighboring genes Neighboring gene synapsin-3-like Neighboring gene poly [ADP-ribose] polymerase 12-like Neighboring gene fish-egg lectin-like Neighboring gene TAFA chemokine like family member 2 Neighboring gene uncharacterized LOC106945283

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112753.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor ETV6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112753.1 Reference P_latipinna-1.0

    Range
    195050..228423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015028845.1 → XP_014884331.1  transcription factor ETV6 isoform X2

    UniProtKB/TrEMBL
    A0A3B3TKA5
    Conserved Domains (2) summary
    cd08535
    Location:57 → 124
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:362 → 448
    ETS; erythroblast transformation specific domain

  2. XM_015028846.1 → XP_014884332.1  transcription factor ETV6 isoform X3

    UniProtKB/TrEMBL
    A0A3B3TKA5
    Conserved Domains (2) summary
    cd08535
    Location:56 → 123
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:361 → 447
    ETS; erythroblast transformation specific domain

  3. XM_015028847.1 → XP_014884333.1  transcription factor ETV6 isoform X4

    UniProtKB/TrEMBL
    A0A3B3TKA5
    Conserved Domains (2) summary
    cd08535
    Location:14 → 81
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:319 → 405
    ETS; erythroblast transformation specific domain

  4. XM_015028848.1 → XP_014884334.1  transcription factor ETV6 isoform X4

    UniProtKB/TrEMBL
    A0A3B3TKA5
    Related
    ENSPLAP00000001023.1, ENSPLAT00000015444.1
    Conserved Domains (2) summary
    cd08535
    Location:14 → 81
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:319 → 405
    ETS; erythroblast transformation specific domain

  5. XM_015028843.1 → XP_014884329.1  transcription factor ETV6 isoform X1

    Conserved Domains (2) summary
    cd08535
    Location:74 → 141
    SAM_PNT-Tel_Yan; Sterile alpha motif (SAM)/Pointed domain of Tel/Yan protein
    smart00413
    Location:379 → 465
    ETS; erythroblast transformation specific domain
Nucleotide Protein
Heading Accession and Version

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