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xylt1 xylosyltransferase I [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106942985, updated on 13-Mar-2024

Summary

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Gene symbol
xylt1
Gene description
xylosyltransferase I
See related
Ensembl:ENSPLAG00000007382
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See xylt1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112714.1 (74827..188356)

NW_015112714.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106942969 Neighboring gene uncharacterized LOC106942994 Neighboring gene uncharacterized LOC106942956 Neighboring gene ribosomal protein S15a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112714.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112714.1 Reference P_latipinna-1.0

    Range
    74827..188356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015026335.1 → XP_014881821.1  xylosyltransferase 1

    UniProtKB/TrEMBL
    A0A3B3TXU3
    Related
    ENSPLAP00000005438.1, ENSPLAT00000007942.1
    Conserved Domains (2) summary
    pfam02485
    Location:325 → 577
    Branch; Core-2/I-Branching enzyme
    pfam12529
    Location:610 → 792
    Xylo_C; Xylosyltransferase C terminal
Nucleotide Protein
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