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glipr1a GLI pathogenesis-related 1a [ Poecilia mexicana ]

Gene ID: 106927787, updated on 16-Mar-2024

Summary

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Gene symbol
glipr1a
Gene description
GLI pathogenesis-related 1a
See related
Ensembl:ENSPMEG00000023973
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
glipr1
Orthologs
zebrafish all
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Genomic context

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See glipr1a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015095483.1 (161822..170188)

NW_015095483.1Genomic Context describing neighboring genes Neighboring gene Krueppel-related zinc finger protein 1-like Neighboring gene uncharacterized LOC106927778 Neighboring gene uncharacterized LOC106927784 Neighboring gene KRR1 small subunit processome component homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015095483.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glioma pathogenesis-related protein 1
Names
GLI pathogenesis related 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015095483.1 Reference P_mexicana-1.0

    Range
    161822..170188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015003588.1 → XP_014859074.1  glioma pathogenesis-related protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3B3Z516, A0A3B3Z5R1
    Related
    ENSPMEP00000034609.1, ENSPMET00000030468.1
    Conserved Domains (1) summary
    cd05385
    Location:25 → 172
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...

  2. XM_015003593.1 → XP_014859079.1  glioma pathogenesis-related protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A3B3Z521
    Related
    ENSPMEP00000034614.1, ENSPMET00000030472.1
    Conserved Domains (1) summary
    cl00133
    Location:25 → 171
    SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...

  3. XM_015003592.1 → XP_014859078.1  glioma pathogenesis-related protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A3B3Z5R1
    Conserved Domains (1) summary
    cl00133
    Location:25 → 171
    SCP; SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in ...

  4. XM_015003586.1 → XP_014859072.1  glioma pathogenesis-related protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B3Z5R1
    Conserved Domains (1) summary
    cd05385
    Location:64 → 211
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...

  5. XM_015003587.1 → XP_014859073.1  glioma pathogenesis-related protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B3Z5R1
    Conserved Domains (1) summary
    cd05385
    Location:52 → 199
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...

  6. XM_015003589.1 → XP_014859075.1  glioma pathogenesis-related protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3B3Z516, A0A3B3Z5R1
    Conserved Domains (1) summary
    cd05385
    Location:25 → 172
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...

  7. XM_015003590.1 → XP_014859076.1  glioma pathogenesis-related protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3B3Z516, A0A3B3Z5R1
    Conserved Domains (1) summary
    cd05385
    Location:25 → 172
    SCP_GLIPR-1_like; SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family. The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich ...
Nucleotide Protein
Heading Accession and Version

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