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map1lc3c microtubule-associated protein 1 light chain 3 gamma [ Poecilia mexicana ]

Gene ID: 106922974, updated on 13-Mar-2024

Summary

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Gene symbol
map1lc3c
Gene description
microtubule-associated protein 1 light chain 3 gamma
See related
Ensembl:ENSPMEG00000010860
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015095103.1 (130227..132133, complement)

NW_015095103.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106922973 Neighboring gene C-type lectin domain family 4 member M-like Neighboring gene striatin-like Neighboring gene growth arrest-specific protein 8-like Neighboring gene BTB/POZ domain-containing protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015095103.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated proteins 1A/1B light chain 3C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015095103.1 Reference P_mexicana-1.0

    Range
    130227..132133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014995763.1 → XP_014851249.1  microtubule-associated proteins 1A/1B light chain 3C

    UniProtKB/TrEMBL
    A0A3B3X1Z5
    Related
    ENSPMEP00000009033.1, ENSPMET00000001462.1
    Conserved Domains (1) summary
    cd01611
    Location:14 → 127
    GABARAP; Ubiquitin domain of GABA-receptor-associated protein
Nucleotide Protein
Heading Accession and Version

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