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ift20 intraflagellar transport 20 homolog (Chlamydomonas) [ Poecilia mexicana ]

Gene ID: 106908667, updated on 13-Mar-2024

Summary

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Gene symbol
ift20
Gene description
intraflagellar transport 20 homolog (Chlamydomonas)
See related
Ensembl:ENSPMEG00000015851
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015097414.1 (56870..61365)

NW_015097414.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor, alpha-induced protein 1 (endothelial) Neighboring gene uncharacterized LOC106908670 Neighboring gene LYR motif containing 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015097414.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in centrosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 20 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015097414.1 Reference P_mexicana-1.0

    Range
    56870..61365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014974821.1 → XP_014830307.1  intraflagellar transport protein 20 homolog isoform X1

    Conserved Domains (1) summary
    pfam14931
    Location:10 → 135
    IFT20; Intraflagellar transport complex B, subunit 20

  2. XM_014974820.1 → XP_014830306.1  intraflagellar transport protein 20 homolog isoform X1

    Conserved Domains (1) summary
    pfam14931
    Location:10 → 135
    IFT20; Intraflagellar transport complex B, subunit 20

  3. XM_014974822.1 → XP_014830308.1  intraflagellar transport protein 20 homolog isoform X2

    UniProtKB/TrEMBL
    A0A3B3XEX0
    Related
    ENSPMEP00000013510.1, ENSPMET00000021230.1
    Conserved Domains (1) summary
    pfam14931
    Location:10 → 128
    IFT20; Intraflagellar transport complex B, subunit 20

RNA

  1. XR_001415865.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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