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ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 [ Calidris pugnax (ruff) ]

Gene ID: 106898792, updated on 13-Mar-2024

Summary

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Gene symbol
ZRSR2
Gene description
zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2
See related
Ensembl:ENSCPUG00000007482
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091257.1 (12643139..12663298)

NW_015091257.1Genomic Context describing neighboring genes Neighboring gene angiotensin converting enzyme 2 Neighboring gene collectrin, amino acid transport regulator Neighboring gene adaptor related protein complex 1 subunit sigma 2 Neighboring gene uncharacterized LOC106898785

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015091257.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pre-mRNA 3'-splice site binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2AF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015091257.1 Reference ASM143184v1

    Range
    12643139..12663298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014960235.1 → XP_014815721.1  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2

    Related
    ENSCPUP00000010539.1, ENSCPUT00000012574.1
    Conserved Domains (3) summary
    smart00356
    Location:313 → 338
    ZnF_C3H1; zinc finger
    cd12540
    Location:206 → 310
    RRM_U2AFBPL; RNA recognition motif in U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 (U2AFBPL) and similar proteins
    pfam00642
    Location:174 → 198
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Nucleotide Protein
Heading Accession and Version

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