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RNF43 ring finger protein 43 [ Calidris pugnax (ruff) ]

Gene ID: 106898462, updated on 13-Mar-2024

Summary

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Gene symbol
RNF43
Gene description
ring finger protein 43
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091201.1 (729347..751231, complement)

NW_015091201.1Genomic Context describing neighboring genes Neighboring gene TSPO associated protein 1 Neighboring gene SPT4 homolog, DSIF elongation factor subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015091201.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015091201.1 Reference ASM143184v1

    Range
    729347..751231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014959717.1 → XP_014815203.1  E3 ubiquitin-protein ligase RNF43

    Conserved Domains (1) summary
    pfam13639
    Location:322 → 364
    zf-RING_2; Ring finger domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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