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FBXO21 F-box protein 21 [ Calidris pugnax (ruff) ]

Gene ID: 106898333, updated on 13-Mar-2024

Summary

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Gene symbol
FBXO21
Gene description
F-box protein 21
See related
Ensembl:ENSCPUG00000007786
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091189.1 (285373..309055)

NW_015091189.1Genomic Context describing neighboring genes Neighboring gene kinase suppressor of ras 2 Neighboring gene nitric oxide synthase 1 Neighboring gene tescalcin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015091189.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015091189.1 Reference ASM143184v1

    Range
    285373..309055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014959517.1 → XP_014815003.1  F-box only protein 21 isoform X2

    Conserved Domains (3) summary
    pfam12937
    Location:29 → 77
    F-box-like; F-box-like
    pfam13369
    Location:241 → 385
    Transglut_core2; Transglutaminase-like superfamily
    cl01548
    Location:490 → 555
    YccV-like; Hemimethylated DNA-binding protein YccV like

  2. XM_014959516.1 → XP_014815002.1  F-box only protein 21 isoform X1

    Related
    ENSCPUP00000010979.1, ENSCPUT00000013089.1
    Conserved Domains (3) summary
    TIGR02097
    Location:490 → 584
    yccV; hemimethylated DNA binding domain
    pfam12937
    Location:29 → 77
    F-box-like; F-box-like
    pfam13369
    Location:241 → 385
    Transglut_core2; Transglutaminase-like superfamily
Nucleotide Protein
Heading Accession and Version

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