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ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 [ Calidris pugnax (ruff) ]

Gene ID: 106897346, updated on 13-Mar-2024

Summary

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Gene symbol
ORMDL3
Gene description
ORMDL sphingolipid biosynthesis regulator 3
See related
Ensembl:ENSCPUG00000006449
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091098.1 (99581..104304, complement)

NW_015091098.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, non-ATPase 3 Neighboring gene gasdermin A Neighboring gene uncharacterized LOC106897348 Neighboring gene leucine rich repeat containing 3C Neighboring gene zona pellucida binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015091098.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sphingolipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SPOTS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ORM1-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015091098.1 Reference ASM143184v1

    Range
    99581..104304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014957934.1 → XP_014813420.1  ORM1-like protein 3

    Related
    ENSCPUP00000009057.1, ENSCPUT00000010812.1
    Conserved Domains (1) summary
    pfam04061
    Location:11 → 146
    ORMDL; ORMDL family
Nucleotide Protein
Heading Accession and Version

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