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ARID3B AT-rich interaction domain 3B [ Calidris pugnax (ruff) ]

Gene ID: 106896572, updated on 13-Mar-2024

Summary

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Gene symbol
ARID3B
Gene description
AT-rich interaction domain 3B
See related
Ensembl:ENSCPUG00000001949
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015091061.1 (552878..610048)

NW_015091061.1Genomic Context describing neighboring genes Neighboring gene ubiquitin like 7 Neighboring gene actin, cytoplasmic type 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015091061.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AT-rich interactive domain-containing protein 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015091061.1 Reference ASM143184v1

    Range
    552878..610048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014956666.1 → XP_014812152.1  AT-rich interactive domain-containing protein 3B

    Related
    ENSCPUP00000002540.1, ENSCPUT00000003069.1
    Conserved Domains (1) summary
    smart00501
    Location:229 → 318
    BRIGHT; BRIGHT, ARID (A/T-rich interaction domain) domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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